Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | CC99x_001070 | Not Available | Positive | 251790 - 252482 | 25085.6 |
| co-chaperone djla | CC99x_001075 | Not Available | Positive | 252493 - 253278 | 29504.0 |
| tetr/acrr family transcriptional regulator | CC99x_001080 | Not Available | Negative | 253367 - 253933 | 21601.0 |
| acyloxyacyl hydrolase | CC99x_001085 | Not Available | Positive | 254181 - 254750 | 21381.6 |
| ribulose-phosphate 3-epimerase | CC99x_001090 | Not Available | Positive | 254865 - 255539 | 24181.5 |
| mfs transporter | CC99x_001095 | Not Available | Positive | 255576 - 257804 | 83412.8 |
| acyl-coa dehydrogenase family protein | CC99x_001100 | Not Available | Positive | 257797 - 258957 | 42298.9 |
| hypothetical protein | CC99x_001105 | Not Available | Positive | 259057 - 259293 | 8132.68 |
| hypothetical protein | CC99x_001110 | Not Available | Negative | 259364 - 260209 | 31092.1 |
| trypsin-like peptidase domain-containing protein | CC99x_001115 | Not Available | Negative | 260391 - 261590 | 42474.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.