Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CC99x_011950 | Not Available | Positive | 2778555 - 2779454 | 33969.6 |
| abc transporter permease | CC99x_011955 | Not Available | Positive | 2779456 - 2780487 | 39147.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | CC99x_011960 | Not Available | Negative | 2780511 - 2781197 | 26507.2 |
| asma family protein | CC99x_011965 | Not Available | Positive | 2781412 - 2783328 | 70981.5 |
| a/g-specific adenine glycosylase | CC99x_011970 | Not Available | Positive | 2783334 - 2784395 | 40183.6 |
| oxidative damage protection protein | CC99x_011975 | Not Available | Positive | 2784451 - 2784723 | 10542.8 |
| dmt family protein | CC99x_011980 | Not Available | Negative | 2784739 - 2785095 | 13568.0 |
| hypothetical protein | CC99x_011985 | Not Available | Negative | 2785217 - 2785612 | 15222.9 |
| Trna-phe | Not Available | Not Available | Positive | 2785845 - 2785920 | Not Available |
| rmd1 family protein | CC99x_011995 | Not Available | Positive | 2786033 - 2786893 | 32156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.