Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide riboside transporter pnuc | CC99x_011900 | Not Available | Positive | 2762917 - 2763522 | 23191.8 |
| eal domain-containing protein | CC99x_011905 | Not Available | Negative | 2763456 - 2765555 | 79805.0 |
| glu/leu/phe/val dehydrogenase | CC99x_011910 | Not Available | Positive | 2765714 - 2766793 | 38900.7 |
| dmt family transporter | CC99x_011915 | Not Available | Negative | 2767056 - 2768099 | 38204.9 |
| hypothetical protein | CC99x_011920 | Not Available | Positive | 2768357 - 2768833 | 18915.4 |
| class i sam-dependent methyltransferase | CC99x_011925 | Not Available | Positive | 2768939 - 2769694 | 29490.6 |
| hypothetical protein | CC99x_011930 | Not Available | Negative | 2769691 - 2774880 | 194871.0 |
| translational gtpase typa | CC99x_011935 | Not Available | Negative | 2775151 - 2776965 | 66892.6 |
| hypothetical protein | CC99x_011940 | Not Available | Negative | 2777126 - 2778103 | 36054.1 |
| glutaredoxin | CC99x_011945 | Not Available | Positive | 2778248 - 2778493 | 9205.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.