Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | CC99x_011850 | Not Available | Positive | 2748036 - 2750408 | 87359.1 |
| hypothetical protein | CC99x_011855 | Not Available | Negative | 2750432 - 2754988 | 171094.0 |
| hypothetical protein | CC99x_011860 | Not Available | Negative | 2755349 - 2756368 | 39341.5 |
| malate dehydrogenase | CC99x_011865 | Not Available | Negative | 2756562 - 2757521 | 33887.5 |
| malate dehydrogenase | CC99x_011870 | Not Available | Negative | 2757539 - 2758840 | 47071.1 |
| 50s ribosomal protein l31 | CC99x_011875 | Not Available | Negative | 2758983 - 2759279 | 10869.1 |
| hypothetical protein | CC99x_011880 | Not Available | Negative | 2760010 - 2760252 | 9631.91 |
| pep-cterm sorting domain-containing protein | CC99x_011885 | Not Available | Negative | 2760296 - 2761267 | 33860.8 |
| hypothetical protein | CC99x_011890 | Not Available | Positive | 2761561 - 2762085 | 19414.8 |
| undecaprenyl-diphosphate phosphatase | CC99x_011895 | Not Available | Positive | 2762109 - 2762915 | 29530.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.