Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | CC99x_011800 | Not Available | Negative | 2737387 - 2737881 | 18288.1 |
| uroporphyrinogen decarboxylase | CC99x_011805 | Not Available | Negative | 2738066 - 2739181 | 41518.6 |
| aaa family atpase | CC99x_011810 | Not Available | Negative | 2739445 - 2740914 | 53629.1 |
| 3-dehydroquinate synthase | CC99x_011815 | Not Available | Negative | 2740934 - 2742043 | 41002.1 |
| shikimate kinase arok | CC99x_011820 | Not Available | Negative | 2742049 - 2742585 | 20067.3 |
| type iv pilus secretin pilq | CC99x_011825 | Not Available | Negative | 2742785 - 2744923 | 76803.2 |
| pilus assembly protein pilp | CC99x_011830 | Not Available | Negative | 2744940 - 2745479 | 19918.1 |
| type 4a pilus biogenesis protein pilo | CC99x_011835 | Not Available | Negative | 2745472 - 2746071 | 22963.7 |
| piln domain-containing protein | CC99x_011840 | Not Available | Negative | 2746052 - 2746633 | 22336.5 |
| pilus assembly protein pilm | CC99x_011845 | Not Available | Negative | 2746630 - 2747694 | 38695.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.