Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | CC99x_011750 | Not Available | Positive | 2729107 - 2729343 | 9000.13 |
| 50s ribosomal protein l33 | CC99x_011755 | Not Available | Positive | 2729355 - 2729513 | 6324.81 |
| fatty acid desaturase | CC99x_011760 | Not Available | Negative | 2729585 - 2730769 | 45221.9 |
| hypothetical protein | CC99x_011765 | Not Available | Positive | 2731140 - 2731994 | 32086.7 |
| yfhl family 4fe-4s dicluster ferredoxin | CC99x_011770 | Not Available | Negative | 2732021 - 2732272 | 9431.18 |
| udp-n-acetylmuramyl peptide synthase | CC99x_011775 | Not Available | Negative | 2732338 - 2733501 | 44071.5 |
| hypothetical protein | CC99x_011780 | Not Available | Positive | 2733565 - 2734611 | 40180.9 |
| pyridoxal phosphate-dependent aminotransferase | CC99x_011785 | Not Available | Positive | 2734592 - 2735890 | 48507.4 |
| tylf/mycf family methyltransferase | CC99x_011790 | Not Available | Negative | 2735868 - 2736593 | 27708.1 |
| tylf/mycf family methyltransferase | CC99x_011795 | Not Available | Negative | 2736638 - 2737357 | 27793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.