Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | CC99x_011700 | Not Available | Negative | 2720971 - 2722191 | 44941.6 |
| fad-dependent monooxygenase | CC99x_011705 | Not Available | Negative | 2722194 - 2723363 | 43318.7 |
| xaa-pro aminopeptidase | CC99x_011710 | Not Available | Negative | 2723372 - 2724673 | 49314.9 |
| upf0149 family protein | CC99x_011715 | Not Available | Negative | 2724739 - 2725320 | 22176.6 |
| cell division protein zapa | CC99x_011720 | Not Available | Positive | 2725454 - 2725882 | 15972.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2725891 - 2726071 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | CC99x_011730 | Not Available | Positive | 2726101 - 2726691 | 22529.5 |
| eve domain-containing protein | CC99x_011735 | Not Available | Positive | 2726849 - 2727319 | 18182.0 |
| ribose-5-phosphate isomerase rpia | CC99x_011740 | Not Available | Positive | 2727343 - 2728011 | 23701.9 |
| thymidine kinase | CC99x_011745 | Not Available | Positive | 2728015 - 2728638 | 23191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.