Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | CC99x_011650 | Not Available | Negative | 2709816 - 2710616 | 30311.4 |
| sulfite exporter taue/safe family protein | CC99x_011655 | Not Available | Negative | 2710634 - 2711440 | 28581.1 |
| phosphoenolpyruvate--protein phosphotransferase | CC99x_011660 | Not Available | Negative | 2711442 - 2713706 | 83939.8 |
| rna pyrophosphohydrolase | CC99x_011665 | Not Available | Negative | 2713852 - 2714364 | 20207.7 |
| outer membrane beta-barrel protein | CC99x_011670 | Not Available | Negative | 2714525 - 2715268 | 26593.3 |
| outer membrane beta-barrel protein | CC99x_011675 | Not Available | Negative | 2715567 - 2716325 | 28103.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | CC99x_011680 | Not Available | Negative | 2716539 - 2717999 | 53408.9 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | CC99x_011685 | Not Available | Negative | 2718019 - 2719383 | 49869.5 |
| glycine cleavage system protein gcvh | CC99x_011690 | Not Available | Negative | 2719387 - 2719785 | 14561.2 |
| glycine cleavage system aminomethyltransferase gcvt | CC99x_011695 | Not Available | Negative | 2719824 - 2720924 | 40737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.