Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | CC99x_011600 | Not Available | Positive | 2699931 - 2700824 | 32371.9 |
| trna dihydrouridine synthase dusb | CC99x_011605 | Not Available | Positive | 2700844 - 2701866 | 37570.2 |
| fis family transcriptional regulator | CC99x_011610 | Not Available | Positive | 2701884 - 2702150 | 10143.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | CC99x_011615 | Not Available | Positive | 2702158 - 2703723 | 57472.8 |
| phosphoribosylamine--glycine ligase | CC99x_011620 | Not Available | Positive | 2703739 - 2705037 | 46958.1 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CC99x_011625 | Not Available | Positive | 2705055 - 2705873 | 30868.9 |
| lysophospholipid acyltransferase family protein | CC99x_011630 | Not Available | Negative | 2706185 - 2706742 | 20087.4 |
| hypothetical protein | CC99x_011635 | Not Available | Negative | 2706912 - 2708396 | 56648.2 |
| dihydrofolate reductase | CC99x_011640 | Not Available | Negative | 2708512 - 2709000 | 18318.2 |
| thymidylate synthase | CC99x_011645 | Not Available | Negative | 2709009 - 2709803 | 30255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.