Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | CC99x_011550 | Not Available | Negative | 2688556 - 2690217 | 58235.3 |
| co-chaperone groes | CC99x_011555 | Not Available | Negative | 2690266 - 2690568 | 11058.4 |
| diguanylate cyclase | CC99x_011560 | Not Available | Positive | 2691142 - 2692761 | 61125.0 |
| divalent-cation tolerance protein cuta | CC99x_011565 | Not Available | Negative | 2692769 - 2693089 | 12182.9 |
| protein-disulfide reductase dsbd | CC99x_011570 | Not Available | Positive | 2693148 - 2694989 | 67826.5 |
| flavohemoglobin expression-modulating qegla motif protein | CC99x_011575 | Not Available | Positive | 2695078 - 2696376 | 48976.4 |
| mechanosensitive ion channel family protein | CC99x_011580 | Not Available | Positive | 2696695 - 2697501 | 31029.6 |
| type ii 3-dehydroquinate dehydratase | CC99x_011585 | Not Available | Positive | 2697642 - 2698076 | 15742.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | CC99x_011590 | Not Available | Positive | 2698103 - 2698582 | 17167.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | CC99x_011595 | Not Available | Positive | 2698588 - 2699928 | 49068.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.