Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | CC99x_011500 | Not Available | Negative | 2680959 - 2681867 | 33555.9 |
| integration host factor subunit beta | CC99x_011505 | Not Available | Negative | 2681989 - 2682285 | 11255.5 |
| rna polymerase sigma factor rpos | CC99x_011510 | Not Available | Positive | 2682506 - 2683477 | 37399.5 |
| duf2970 domain-containing protein | CC99x_011515 | Not Available | Negative | 2683612 - 2683830 | 7988.17 |
| cell division protein zapb | CC99x_011520 | Not Available | Positive | 2684193 - 2684447 | 9918.36 |
| tigr00153 family protein | CC99x_011525 | Not Available | Negative | 2684627 - 2685298 | 25478.1 |
| dna-binding domain-containing protein | CC99x_011530 | Not Available | Negative | 2685392 - 2686174 | 30123.2 |
| duf692 domain-containing protein | CC99x_011535 | Not Available | Negative | 2686174 - 2687187 | 39102.8 |
| duf2282 domain-containing protein | CC99x_011540 | Not Available | Negative | 2687222 - 2687482 | 8958.75 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | CC99x_011545 | Not Available | Positive | 2687585 - 2688238 | 24318.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.