Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase a | CC99x_011450 | Not Available | Negative | 2669350 - 2670318 | 35064.7 |
| hypothetical protein | CC99x_011455 | Not Available | Positive | 2670631 - 2671386 | 27823.0 |
| uracil-dna glycosylase | CC99x_011460 | Not Available | Negative | 2671575 - 2672261 | 25558.0 |
| patatin-like phospholipase family protein | CC99x_011465 | Not Available | Negative | 2672382 - 2673740 | 50322.5 |
| dna mismatch repair endonuclease muth | CC99x_011470 | Not Available | Positive | 2673794 - 2674510 | 26780.0 |
| duf3025 domain-containing protein | CC99x_011475 | Not Available | Negative | 2674413 - 2675315 | 35513.1 |
| gamma-glutamylcyclotransferase | CC99x_011480 | Not Available | Negative | 2675263 - 2675793 | 20152.1 |
| inorganic phosphate transporter | CC99x_011485 | Not Available | Positive | 2676178 - 2677431 | 44452.3 |
| mfs transporter | CC99x_011490 | Not Available | Negative | 2677459 - 2678766 | 47716.7 |
| sel1 repeat family protein | CC99x_011495 | Not Available | Negative | 2678852 - 2680930 | 79197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.