Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 2660887 - 2660963 | Not Available |
| hypothetical protein | CC99x_011405 | Not Available | Negative | 2661048 - 2661449 | 14858.9 |
| hypothetical protein | CC99x_011410 | Not Available | Positive | 2661571 - 2663043 | 55551.7 |
| hypothetical protein | CC99x_011415 | Not Available | Positive | 2663162 - 2663551 | 14440.1 |
| transposase family protein | CC99x_011420 | Not Available | Negative | 2663666 - 2664409 | 28906.5 |
| hypothetical protein | CC99x_011425 | Not Available | Negative | 2664369 - 2664824 | 17251.5 |
| alkaline phosphatase d family protein | CC99x_011430 | Not Available | Positive | 2665035 - 2666399 | 50611.4 |
| eama family transporter | CC99x_011435 | Not Available | Positive | 2666636 - 2667574 | 35479.2 |
| na+/h+ antiporter nhaa | CC99x_011440 | Not Available | Negative | 2667614 - 2668783 | 42108.9 |
| nucleoside deaminase | CC99x_011445 | Not Available | Negative | 2668836 - 2669303 | 17381.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.