Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gsph/fimt family pseudopilin | CC99x_011300 | Not Available | Positive | 2640013 - 2640510 | 18510.6 |
| gsph/fimt family pseudopilin | CC99x_011305 | Not Available | Positive | 2640575 - 2641108 | 18973.4 |
| type iv pilus modification protein pilv | CC99x_011310 | Not Available | Positive | 2641287 - 2641886 | 21147.3 |
| pilw family protein | CC99x_011315 | Not Available | Positive | 2641883 - 2642671 | 28629.1 |
| hypothetical protein | CC99x_011320 | Not Available | Positive | 2642678 - 2643214 | 19909.7 |
| hypothetical protein | CC99x_011325 | Not Available | Positive | 2643223 - 2647074 | 139976.0 |
| hypothetical protein | CC99x_011330 | Not Available | Positive | 2647081 - 2647569 | 18024.7 |
| type iv pilin protein | CC99x_011335 | Not Available | Positive | 2647597 - 2647992 | 13840.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CC99x_011340 | Not Available | Negative | 2648023 - 2649027 | 36878.2 |
| signal peptidase ii | CC99x_011345 | Not Available | Negative | 2649024 - 2649524 | 19086.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.