Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | CC99x_011250 | Not Available | Negative | 2630974 - 2632008 | 38206.3 |
| holliday junction branch migration protein ruva | CC99x_011255 | Not Available | Negative | 2632005 - 2632604 | 22060.0 |
| crossover junction endodeoxyribonuclease ruvc | CC99x_011260 | Not Available | Negative | 2632601 - 2633095 | 18113.0 |
| yebc/pmpr family dna-binding transcriptional regulator | CC99x_011265 | Not Available | Negative | 2633230 - 2633976 | 27125.1 |
| dihydroneopterin triphosphate diphosphatase | CC99x_011270 | Not Available | Negative | 2634008 - 2634412 | 15441.5 |
| aspartate--trna ligase | CC99x_011275 | Not Available | Negative | 2634450 - 2636231 | 66940.8 |
| zinc ribbon domain-containing protein | CC99x_011280 | Not Available | Negative | 2636286 - 2636525 | 8899.48 |
| hypothetical protein | CC99x_011285 | Not Available | Positive | 2636721 - 2637017 | 11081.3 |
| hypothetical protein | CC99x_011290 | Not Available | Positive | 2637056 - 2638675 | 60131.4 |
| sigma-54 dependent transcriptional regulator | CC99x_011295 | Not Available | Positive | 2638701 - 2640029 | 49746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.