Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_011200 | Not Available | Negative | 2622681 - 2623670 | 35069.6 |
| Trna-lys | Not Available | Not Available | Positive | 2624285 - 2624360 | Not Available |
| hypothetical protein | CC99x_011210 | Not Available | Negative | 2624460 - 2625413 | 33744.2 |
| tol-pal system protein ybgf | CC99x_011215 | Not Available | Negative | 2625580 - 2626542 | 35396.4 |
| peptidoglycan-associated lipoprotein pal | CC99x_011220 | Not Available | Negative | 2626552 - 2627082 | 19277.5 |
| tol-pal system beta propeller repeat protein tolb | CC99x_011225 | Not Available | Negative | 2627104 - 2628456 | 49183.8 |
| cell envelope integrity protein tola | CC99x_011230 | Not Available | Negative | 2628453 - 2629391 | 35485.1 |
| protein tolr | CC99x_011235 | Not Available | Negative | 2629375 - 2629821 | 16169.8 |
| protein tolq | CC99x_011240 | Not Available | Negative | 2629833 - 2630552 | 26830.5 |
| ybgc/fadm family acyl-coa thioesterase | CC99x_011245 | Not Available | Negative | 2630549 - 2630971 | 15988.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.