Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polynucleotide adenylyltransferase pcnb | CC99x_011150 | Not Available | Negative | 2613120 - 2614388 | 48820.4 |
| Trna-glu | Not Available | Not Available | Positive | 2614922 - 2614997 | Not Available |
| class i sam-dependent methyltransferase | CC99x_011160 | Not Available | Positive | 2615032 - 2615691 | 24509.7 |
| retroviral-like aspartic protease family protein | CC99x_011165 | Not Available | Positive | 2616163 - 2617110 | 35466.2 |
| hypothetical protein | CC99x_011170 | Not Available | Negative | 2617114 - 2618094 | 37420.5 |
| superoxide dismutase family protein | CC99x_011175 | Not Available | Negative | 2618119 - 2618685 | 20257.4 |
| sulfurtransferase | CC99x_011180 | Not Available | Positive | 2618868 - 2619695 | 31817.0 |
| inorganic diphosphatase | CC99x_011185 | Not Available | Positive | 2619904 - 2620452 | 20479.9 |
| queuosine precursor transporter | CC99x_011190 | Not Available | Positive | 2620620 - 2621303 | 25478.8 |
| pp_02196 | CC99x_011195 | Not Available | Positive | 2621278 - 2622432 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.