Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | CC99x_011100 | Not Available | Positive | 2604817 - 2605317 | 18705.0 |
| nitroreductase | CC99x_011105 | Not Available | Positive | 2605356 - 2606021 | 25350.4 |
| hypothetical protein | CC99x_011110 | Not Available | Positive | 2606129 - 2606440 | 11558.5 |
| phasin family protein | CC99x_011115 | Not Available | Negative | 2606512 - 2606871 | 13544.9 |
| polyhydroxyalkanoate synthesis repressor phar | CC99x_011120 | Not Available | Negative | 2606967 - 2607542 | 22318.2 |
| acetoacetyl-coa reductase | CC99x_011125 | Not Available | Negative | 2607703 - 2608449 | 26433.0 |
| acetate--coa ligase | CC99x_011130 | Not Available | Negative | 2608523 - 2610475 | 73174.3 |
| hypothetical protein | CC99x_011135 | Not Available | Positive | 2610645 - 2610938 | 9882.78 |
| glucose-6-phosphate isomerase | CC99x_011140 | Not Available | Negative | 2610988 - 2612634 | 61182.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CC99x_011145 | Not Available | Negative | 2612644 - 2613123 | 18072.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.