Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2592755 - 2594295 | Not Available |
| tyrosine--trna ligase | CC99x_011055 | Not Available | Negative | 2595004 - 2596212 | 45228.1 |
| peptidoglycan dd-metalloendopeptidase family protein | CC99x_011060 | Not Available | Positive | 2596363 - 2597829 | 54652.0 |
| anhydro-n-acetylmuramic acid kinase | CC99x_011065 | Not Available | Positive | 2597833 - 2599116 | 46513.9 |
| iron-sulfur cluster insertion protein erpa | CC99x_011070 | Not Available | Negative | 2599142 - 2599513 | 13322.5 |
| protoporphyrinogen oxidase hemj | CC99x_011075 | Not Available | Positive | 2599738 - 2600175 | 17118.7 |
| rubredoxin | CC99x_011080 | Not Available | Negative | 2600199 - 2600351 | 5715.85 |
| glutamate-1-semialdehyde 2,1-aminomutase | CC99x_011085 | Not Available | Positive | 2600543 - 2601838 | 46048.4 |
| aaa family atpase | CC99x_011090 | Not Available | Positive | 2601849 - 2603381 | 58253.0 |
| dna/rna nuclease sfsa | CC99x_011095 | Not Available | Negative | 2603725 - 2604507 | 29630.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.