Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doti/icml family type iv secretion protein | CC99x_011000 | Not Available | Positive | 2583535 - 2584164 | 23802.3 |
| doti/icml family type iv secretion protein | CC99x_011005 | Not Available | Positive | 2584167 - 2584778 | 23383.6 |
| hypothetical protein | CC99x_011010 | Not Available | Negative | 2584974 - 2586050 | 40550.2 |
| cytochrome c-type biogenesis protein ccmh | CC99x_011015 | Not Available | Negative | 2586047 - 2586460 | 15932.6 |
| dsbe family thiol:disulfide interchange protein | CC99x_011020 | Not Available | Negative | 2586464 - 2587066 | 23132.5 |
| heme lyase ccmf/nrfe family subunit | CC99x_011025 | Not Available | Negative | 2587063 - 2588973 | 71285.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2589068 - 2589183 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2589345 - 2592250 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2592442 - 2592517 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2592564 - 2592640 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.