Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_000970 | Not Available | Negative | 229045 - 232260 | 121130.0 |
| glucose 1-dehydrogenase | CC99x_000975 | Not Available | Positive | 232480 - 233244 | 27567.4 |
| hypothetical protein | CC99x_000980 | Not Available | Negative | 233564 - 234454 | 34340.7 |
| sco family protein | CC99x_000985 | Not Available | Negative | 234631 - 235275 | 24047.9 |
| heme o synthase | CC99x_000990 | Not Available | Negative | 235280 - 236200 | 34053.2 |
| cox15/ctaa family protein | CC99x_000995 | Not Available | Negative | 236187 - 237203 | 37615.5 |
| hypothetical protein | CC99x_001000 | Not Available | Negative | 237246 - 237869 | 23994.8 |
| surf1 family protein | CC99x_001005 | Not Available | Negative | 237866 - 238534 | 25396.8 |
| duf2909 domain-containing protein | CC99x_001010 | Not Available | Positive | 238604 - 238933 | 12456.5 |
| cytochrome c oxidase subunit 3 | CC99x_001015 | Not Available | Negative | 238818 - 239699 | 33501.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.