Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | CC99x_010950 | Not Available | Negative | 2575466 - 2575942 | 17519.4 |
| 50s ribosomal protein l19 | CC99x_010955 | Not Available | Negative | 2575967 - 2576350 | 14509.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | CC99x_010960 | Not Available | Negative | 2576367 - 2577116 | 27929.5 |
| ribosome maturation factor rimm | CC99x_010965 | Not Available | Negative | 2577125 - 2577691 | 21687.0 |
| 30s ribosomal protein s16 | CC99x_010970 | Not Available | Negative | 2577681 - 2577947 | 10167.4 |
| dmt family transporter | CC99x_010975 | Not Available | Positive | 2578201 - 2579142 | 35136.0 |
| hypothetical protein | CC99x_010980 | Not Available | Positive | 2579283 - 2579780 | 17929.4 |
| signal recognition particle protein | CC99x_010985 | Not Available | Negative | 2579852 - 2581222 | 50209.1 |
| cytochrome c biogenesis protein ccsa | CC99x_010990 | Not Available | Positive | 2581503 - 2582084 | 21862.8 |
| hlyc/corc family transporter | CC99x_010995 | Not Available | Positive | 2582107 - 2583381 | 47286.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.