Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | CC99x_010900 | Not Available | Negative | 2564634 - 2565617 | 36628.2 |
| cpbp family intramembrane metalloprotease | CC99x_010905 | Not Available | Negative | 2565680 - 2566594 | 34689.5 |
| hypothetical protein | CC99x_010910 | Not Available | Negative | 2566645 - 2566917 | 9101.12 |
| coa transferase | CC99x_010915 | Not Available | Negative | 2567025 - 2568386 | 50378.6 |
| hypothetical protein | CC99x_010920 | Not Available | Negative | 2568547 - 2569902 | 51079.5 |
| fad-binding protein | CC99x_010925 | Not Available | Negative | 2570174 - 2571124 | 34003.1 |
| electron transfer flavoprotein subunit beta/fixa family protein | CC99x_010930 | Not Available | Negative | 2571126 - 2571878 | 27806.2 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | CC99x_010935 | Not Available | Positive | 2572023 - 2573639 | 59653.2 |
| helix-turn-helix transcriptional regulator | CC99x_010940 | Not Available | Positive | 2573715 - 2574584 | 33966.0 |
| dsbc family protein | CC99x_010945 | Not Available | Negative | 2574658 - 2575419 | 28464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.