Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l1 | CC99x_010850 | Not Available | Negative | 2560479 - 2561186 | 25128.6 |
| 50s ribosomal protein l11 | CC99x_010855 | Not Available | Negative | 2561190 - 2561618 | 15089.4 |
| transcription termination/antitermination protein nusg | CC99x_010860 | Not Available | Negative | 2561673 - 2562230 | 21286.6 |
| preprotein translocase subunit sece | CC99x_010865 | Not Available | Negative | 2562233 - 2562613 | 13902.3 |
| Trna-trp | Not Available | Not Available | Positive | 2562641 - 2562716 | Not Available |
| elongation factor tu | CC99x_010875 | Not Available | Negative | 2562776 - 2563960 | 42858.6 |
| Trna-thr | Not Available | Not Available | Positive | 2564031 - 2564105 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2564129 - 2564202 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2564242 - 2564326 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2564467 - 2564542 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.