Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | CC99x_010650 | Not Available | Negative | 2528751 - 2530316 | 58407.1 |
| hypothetical protein | CC99x_010655 | Not Available | Positive | 2530656 - 2531387 | 27188.5 |
| transcriptional repressor | CC99x_010660 | Not Available | Negative | 2531704 - 2532111 | 15089.3 |
| hypothetical protein | CC99x_010665 | Not Available | Negative | 2532273 - 2532527 | 8816.46 |
| nicotinamide mononucleotide transporter family protein | CC99x_010670 | Not Available | Negative | 2532617 - 2532883 | 9923.29 |
| 50s ribosomal protein l17 | CC99x_010675 | Not Available | Negative | 2533493 - 2533876 | 14413.8 |
| dna-directed rna polymerase subunit alpha | CC99x_010680 | Not Available | Negative | 2533939 - 2534937 | 36938.8 |
| 30s ribosomal protein s4 | CC99x_010685 | Not Available | Negative | 2534959 - 2535573 | 23698.6 |
| 30s ribosomal protein s11 | CC99x_010690 | Not Available | Negative | 2535603 - 2536094 | 17109.2 |
| 30s ribosomal protein s13 | CC99x_010695 | Not Available | Negative | 2536126 - 2536494 | 13935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.