Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine--oxo-acid transaminase | CC99x_000920 | Not Available | Positive | 217744 - 218952 | 43810.4 |
| dmt family transporter | CC99x_000925 | Not Available | Positive | 219041 - 219982 | 34411.1 |
| 4-hydroxybenzoate octaprenyltransferase | CC99x_000930 | Not Available | Positive | 219984 - 220835 | 31884.1 |
| hypothetical protein | CC99x_000935 | Not Available | Negative | 220866 - 222605 | 63663.9 |
| zinc abc transporter substrate-binding protein | CC99x_000940 | Not Available | Negative | 223036 - 224013 | 37087.0 |
| atp-binding cassette domain-containing protein | CC99x_000945 | Not Available | Positive | 224053 - 224853 | 29090.8 |
| metal abc transporter permease | CC99x_000950 | Not Available | Positive | 224843 - 225658 | 29317.6 |
| hypothetical protein | CC99x_000955 | Not Available | Positive | 225836 - 227245 | 50977.6 |
| hypothetical protein | CC99x_000960 | Not Available | Positive | 227685 - 228410 | 28618.3 |
| hypothetical protein | CC99x_000965 | Not Available | Positive | 228460 - 229062 | 22288.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.