Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | CC99x_010450 | Not Available | Positive | 2477061 - 2478104 | 38434.6 |
| hypothetical protein | CC99x_010455 | Not Available | Negative | 2478180 - 2478437 | 9746.0 |
| fad-dependent oxidoreductase | CC99x_010460 | Not Available | Negative | 2478590 - 2479882 | 48391.7 |
| hypothetical protein | CC99x_010465 | Not Available | Negative | 2480088 - 2480714 | 22903.5 |
| protein kinase | CC99x_010470 | Not Available | Negative | 2480876 - 2482837 | 73689.7 |
| duf1328 domain-containing protein | CC99x_010475 | Not Available | Positive | 2483210 - 2483407 | 7016.11 |
| hypothetical protein | CC99x_010480 | Not Available | Negative | 2483445 - 2491496 | 298434.0 |
| multidrug effflux mfs transporter | CC99x_010485 | Not Available | Negative | 2491669 - 2492865 | 43328.0 |
| mechanosensitive ion channel | CC99x_010490 | Not Available | Negative | 2493100 - 2493909 | 29860.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | CC99x_010495 | Not Available | Positive | 2494198 - 2495331 | 41069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.