Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grpb family protein | CC99x_010400 | Not Available | Negative | 2465102 - 2465659 | 21163.5 |
| hypothetical protein | CC99x_010405 | Not Available | Negative | 2465726 - 2467381 | 61292.0 |
| catalase | CC99x_010410 | Not Available | Negative | 2468117 - 2469556 | 54824.5 |
| adenosine deaminase | CC99x_010415 | Not Available | Positive | 2469796 - 2471214 | 53539.0 |
| lyse family transporter | CC99x_010420 | Not Available | Positive | 2471343 - 2471903 | 20572.6 |
| hypothetical protein | CC99x_010425 | Not Available | Positive | 2472096 - 2473037 | 35609.9 |
| hypothetical protein | CC99x_010430 | Not Available | Negative | 2473043 - 2474203 | 43395.2 |
| hypothetical protein | CC99x_010435 | Not Available | Negative | 2474437 - 2475186 | 26519.6 |
| hypothetical protein | CC99x_010440 | Not Available | Negative | 2475249 - 2475818 | 19909.8 |
| f-box protein | CC99x_010445 | Not Available | Negative | 2476117 - 2476869 | 29213.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.