Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_010350 | Not Available | Negative | 2453049 - 2454365 | 50206.2 |
| yheu family protein | CC99x_010355 | Not Available | Positive | 2454598 - 2454828 | 8947.59 |
| hypothetical protein | CC99x_010360 | Not Available | Positive | 2454870 - 2456054 | 45636.9 |
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | CC99x_010365 | Not Available | Negative | 2456124 - 2457092 | 34991.6 |
| patatin-like phospholipase family protein | CC99x_010370 | Not Available | Negative | 2457365 - 2459518 | 79661.3 |
| porin family protein | CC99x_010375 | Not Available | Positive | 2460037 - 2460636 | 22283.7 |
| s-formylglutathione hydrolase | CC99x_010380 | Not Available | Negative | 2460711 - 2461559 | 31270.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | CC99x_010385 | Not Available | Negative | 2461576 - 2462685 | 39184.7 |
| acetyl-coa c-acetyltransferase | CC99x_010390 | Not Available | Negative | 2462705 - 2463982 | 45564.4 |
| hypothetical protein | CC99x_010395 | Not Available | Negative | 2463984 - 2464949 | 37013.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.