Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | CC99x_010300 | Not Available | Negative | 2443990 - 2444826 | 30569.5 |
| hypothetical protein | CC99x_010305 | Not Available | Positive | 2445050 - 2445469 | 15320.6 |
| class d beta-lactamase | CC99x_010310 | Not Available | Positive | 2445528 - 2446307 | 29496.5 |
| hypothetical protein | CC99x_010315 | Not Available | Negative | 2446519 - 2447184 | 26190.2 |
| methyltransferase domain-containing protein | CC99x_010320 | Not Available | Positive | 2447430 - 2448461 | 39432.3 |
| hypothetical protein | CC99x_010325 | Not Available | Negative | 2448458 - 2449720 | 47791.3 |
| udp-n-acetylmuramyl peptide synthase | CC99x_010330 | Not Available | Negative | 2449693 - 2450709 | 38287.7 |
| gnat family n-acetyltransferase | CC99x_010335 | Not Available | Negative | 2451116 - 2451589 | 18010.9 |
| acyl-coa thioesterase | CC99x_010340 | Not Available | Negative | 2451623 - 2452042 | 16021.3 |
| sdr family oxidoreductase | CC99x_010345 | Not Available | Negative | 2452257 - 2452943 | 25729.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.