Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_010250 | Not Available | Negative | 2431291 - 2432067 | 30119.7 |
| sel1 repeat family protein | CC99x_010255 | Not Available | Negative | 2432433 - 2434085 | 60204.2 |
| hypothetical protein | CC99x_010260 | Not Available | Negative | 2434240 - 2434818 | 22400.7 |
| thiopurine s-methyltransferase | CC99x_010265 | Not Available | Positive | 2434998 - 2435705 | 27166.6 |
| hypothetical protein | CC99x_010270 | Not Available | Negative | 2435722 - 2436378 | 25098.8 |
| cation diffusion facilitator family transporter | CC99x_010275 | Not Available | Negative | 2436394 - 2437302 | 33744.2 |
| tolc family protein | CC99x_010280 | Not Available | Positive | 2437625 - 2438917 | 49227.9 |
| efflux rnd transporter periplasmic adaptor subunit | CC99x_010285 | Not Available | Positive | 2438950 - 2439909 | 34898.4 |
| cusa/czca family heavy metal efflux rnd transporter | CC99x_010290 | Not Available | Positive | 2439921 - 2443088 | 116001.0 |
| hydrolase | CC99x_010295 | Not Available | Positive | 2443322 - 2443948 | 23051.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.