Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_010200 | Not Available | Negative | 2420367 - 2420699 | 12289.6 |
| duf2231 domain-containing protein | CC99x_010205 | Not Available | Negative | 2420737 - 2421270 | 19757.4 |
| hypothetical protein | CC99x_010210 | Not Available | Negative | 2421279 - 2421620 | 12955.6 |
| efflux rnd transporter permease subunit | CC99x_010215 | Not Available | Positive | 2421989 - 2422207 | 7913.94 |
| putative dna binding domain-containing protein | CC99x_010220 | Not Available | Negative | 2422435 - 2423889 | 55599.1 |
| site-specific integrase | CC99x_010225 | Not Available | Negative | 2423931 - 2425160 | 47524.9 |
| heat repeat domain-containing protein | CC99x_010230 | Not Available | Negative | 2425538 - 2426524 | 37647.7 |
| fic family protein | CC99x_010235 | Not Available | Negative | 2427074 - 2428324 | 47584.9 |
| hypothetical protein | CC99x_010240 | Not Available | Positive | 2428602 - 2429753 | 44217.0 |
| hypothetical protein | CC99x_010245 | Not Available | Positive | 2429750 - 2431009 | 47905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.