Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CC99x_010150 | Not Available | Positive | 2411917 - 2412837 | 33659.5 |
| Trna-gln | Not Available | Not Available | Positive | 2412817 - 2412891 | Not Available |
| ribose-phosphate pyrophosphokinase | CC99x_010160 | Not Available | Positive | 2412912 - 2413856 | 34312.7 |
| 50s ribosomal protein l25/general stress protein ctc | CC99x_010165 | Not Available | Positive | 2413996 - 2414643 | 24233.5 |
| aminoacyl-trna hydrolase | CC99x_010170 | Not Available | Positive | 2414664 - 2415248 | 21864.4 |
| redox-regulated atpase ychf | CC99x_010175 | Not Available | Positive | 2415284 - 2416369 | 39479.1 |
| Trna-met | Not Available | Not Available | Positive | 2416458 - 2416534 | Not Available |
| hypothetical protein | CC99x_010185 | Not Available | Negative | 2416711 - 2417481 | 29073.4 |
| copper oxidase | CC99x_010190 | Not Available | Negative | 2417538 - 2418920 | 51316.8 |
| tolc family protein | CC99x_010195 | Not Available | Negative | 2418941 - 2420380 | 54283.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.