Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | CC99x_010000 | Not Available | Positive | 2384973 - 2386460 | 56669.1 |
| ribosome-associated translation inhibitor raia | CC99x_010005 | Not Available | Positive | 2386482 - 2386790 | 11647.9 |
| pts iia-like nitrogen regulatory protein ptsn | CC99x_010010 | Not Available | Positive | 2386857 - 2387333 | 17583.2 |
| hypothetical protein | CC99x_010015 | Not Available | Positive | 2387348 - 2388208 | 32308.4 |
| rnase adapter rapz | CC99x_010020 | Not Available | Positive | 2388229 - 2389071 | 32166.1 |
| hypothetical protein | CC99x_010025 | Not Available | Positive | 2389077 - 2389571 | 17699.8 |
| hpr family phosphocarrier protein | CC99x_010030 | Not Available | Positive | 2389722 - 2389991 | 9929.31 |
| sel1 repeat family protein | CC99x_010035 | Not Available | Positive | 2390033 - 2391001 | 36360.0 |
| pyridoxal-phosphate dependent enzyme | CC99x_010040 | Not Available | Positive | 2391080 - 2392015 | 33545.7 |
| duf805 domain-containing protein | CC99x_010045 | Not Available | Negative | 2392068 - 2392481 | 15598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.