Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CC99x_000870 | Not Available | Negative | 207083 - 207730 | 24908.0 |
| orotate phosphoribosyltransferase | CC99x_000875 | Not Available | Negative | 207895 - 208545 | 24077.8 |
| exodeoxyribonuclease iii | CC99x_000880 | Not Available | Positive | 208696 - 209472 | 29705.5 |
| ribonuclease ph | CC99x_000885 | Not Available | Negative | 209864 - 210580 | 26553.3 |
| yicc family protein | CC99x_000890 | Not Available | Positive | 210812 - 211678 | 33027.8 |
| guanylate kinase | CC99x_000895 | Not Available | Positive | 211682 - 212293 | 23515.1 |
| dna-directed rna polymerase subunit omega | CC99x_000900 | Not Available | Positive | 212320 - 212529 | 7699.07 |
| rela/spot family protein | CC99x_000905 | Not Available | Positive | 212538 - 214655 | 80132.8 |
| atp-dependent dna helicase recg | CC99x_000910 | Not Available | Positive | 214655 - 216760 | 79475.6 |
| arginase | CC99x_000915 | Not Available | Positive | 216824 - 217726 | 33332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.