Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase insf | CC99x_007820 | Not Available | Positive | 1791951 - 1792859 | 35518.2 |
| hypothetical protein | CC99x_007825 | Not Available | Positive | 1792978 - 1793424 | 17656.2 |
| Transposase insf | CC99x_007830 | Not Available | Negative | 1793610 - 1794518 | 35518.2 |
| Issod1, transposase orfa | CC99x_007835 | Not Available | Negative | 1794452 - 1794766 | 12091.4 |
| hypothetical protein | CC99x_007840 | Not Available | Positive | 1794893 - 1795285 | 14600.6 |
| hypothetical protein | CC99x_007845 | Not Available | Positive | 1795288 - 1795653 | 13754.0 |
| hypothetical protein | CC99x_007850 | Not Available | Negative | 1795809 - 1796699 | 34063.9 |
| Attr | Not Available | Not Available | Positive | 1797085 - 1797134 | Not Available |
| Hypothetical protein | CC99x_007855 | Not Available | Negative | 1797394 - 1797882 | 18438.6 |
| chromosomal replication initiator protein dnaa | CC99x_000005 | Not Available | Positive | 1 - 1383 | 50881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.