Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c1 | CC99x_009850 | Not Available | Negative | 2358321 - 2359085 | 28671.6 |
| cytochrome bc complex cytochrome b subunit | CC99x_009855 | Not Available | Negative | 2359109 - 2360353 | 47468.0 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CC99x_009860 | Not Available | Negative | 2360357 - 2360941 | 21072.3 |
| peptidoglycan dd-metalloendopeptidase family protein | CC99x_009865 | Not Available | Negative | 2361160 - 2361996 | 30675.3 |
| hypothetical protein | CC99x_009870 | Not Available | Positive | 2362058 - 2363344 | 46112.2 |
| hypothetical protein | CC99x_009875 | Not Available | Negative | 2363361 - 2363990 | 22382.3 |
| hypothetical protein | CC99x_009880 | Not Available | Positive | 2364205 - 2364867 | 24578.9 |
| hypothetical protein | CC99x_009885 | Not Available | Negative | 2365110 - 2365664 | 20600.0 |
| riboflavin synthase | CC99x_009890 | Not Available | Positive | 2365909 - 2366526 | 22265.1 |
| hypothetical protein | CC99x_009895 | Not Available | Positive | 2366697 - 2367518 | 30384.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.