Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf721 domain-containing protein | CC99x_009795 | Not Available | Positive | 2348441 - 2348908 | 17564.3 |
| arylamine n-acetyltransferase | CC99x_009800 | Not Available | Positive | 2349200 - 2350009 | 31677.5 |
| hypothetical protein | CC99x_009805 | Not Available | Positive | 2350198 - 2350872 | 26022.3 |
| duf4238 domain-containing protein | CC99x_009810 | Not Available | Negative | 2350882 - 2351814 | 35557.4 |
| fic family protein | CC99x_009815 | Not Available | Negative | 2351981 - 2353060 | 41375.9 |
| duf4236 domain-containing protein | CC99x_009820 | Not Available | Positive | 2354071 - 2354178 | 3950.09 |
| vrr-nuc domain-containing protein | CC99x_009830 | Not Available | Positive | 2354382 - 2355935 | 59582.4 |
| hypothetical protein | CC99x_009835 | Not Available | Negative | 2355997 - 2356689 | 26910.8 |
| clpxp protease specificity-enhancing factor | CC99x_009840 | Not Available | Negative | 2357246 - 2357671 | 15288.9 |
| stringent starvation protein a | CC99x_009845 | Not Available | Negative | 2357668 - 2358303 | 24384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.