Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 2329040 - 2329112 | Not Available |
| pilin | CC99x_009700 | Not Available | Positive | 2329416 - 2329838 | 14061.9 |
| hypothetical protein | CC99x_009705 | Not Available | Positive | 2329967 - 2331820 | 71997.2 |
| endonuclease domain-containing protein | CC99x_009710 | Not Available | Positive | 2332072 - 2332431 | 14584.5 |
| glycosyltransferase family 2 protein | CC99x_009715 | Not Available | Positive | 2332557 - 2333486 | 34902.3 |
| flippase-like domain-containing protein | CC99x_009720 | Not Available | Positive | 2333479 - 2334435 | 36527.9 |
| type iv-a pilus assembly atpase pilb | CC99x_009725 | Not Available | Positive | 2334545 - 2336251 | 62802.0 |
| type ii secretion system f family protein | CC99x_009730 | Not Available | Positive | 2336254 - 2337492 | 44889.9 |
| a24 family peptidase | CC99x_009735 | Not Available | Positive | 2337520 - 2338410 | 33159.8 |
| dephospho-coa kinase | CC99x_009740 | Not Available | Positive | 2338407 - 2339027 | 23547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.