Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | CC99x_009645 | Not Available | Negative | 2320069 - 2320986 | 34734.5 |
| peptide deformylase | CC99x_009650 | Not Available | Positive | 2321091 - 2321774 | 25378.5 |
| sdr family oxidoreductase | CC99x_009655 | Not Available | Positive | 2321956 - 2322864 | 33571.0 |
| class i sam-dependent methyltransferase | CC99x_009660 | Not Available | Negative | 2322995 - 2323909 | 35382.6 |
| outer membrane beta-barrel protein | CC99x_009665 | Not Available | Negative | 2323912 - 2324661 | 27800.2 |
| hypothetical protein | CC99x_009670 | Not Available | Negative | 2324720 - 2324965 | 9198.1 |
| hypothetical protein | CC99x_009675 | Not Available | Negative | 2325374 - 2326390 | 39062.1 |
| hypothetical protein | CC99x_009680 | Not Available | Negative | 2326482 - 2327702 | 46413.8 |
| hypothetical protein | CC99x_009685 | Not Available | Positive | 2327842 - 2328678 | 32055.3 |
| hypothetical protein | CC99x_009690 | Not Available | Positive | 2328700 - 2328918 | 7564.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.