Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | CC99x_009595 | Not Available | Negative | 2309219 - 2310193 | 36631.3 |
| aminoglycoside phosphotransferase family protein | CC99x_009600 | Not Available | Negative | 2310224 - 2311186 | 36895.6 |
| abc transporter atp-binding protein/permease | CC99x_009605 | Not Available | Negative | 2311186 - 2312988 | 67917.4 |
| sgnh/gdsl hydrolase family protein | CC99x_009610 | Not Available | Negative | 2312972 - 2314027 | 40393.0 |
| yran family protein | CC99x_009615 | Not Available | Positive | 2314026 - 2314454 | 16390.9 |
| phosphoheptose isomerase | CC99x_009620 | Not Available | Positive | 2314508 - 2315104 | 21360.6 |
| bon domain-containing protein | CC99x_009625 | Not Available | Positive | 2315092 - 2315700 | 21928.7 |
| fad-binding protein | CC99x_009630 | Not Available | Positive | 2315707 - 2317092 | 50340.8 |
| hypothetical protein | CC99x_009635 | Not Available | Positive | 2317248 - 2317700 | 16428.4 |
| hypothetical protein | CC99x_009640 | Not Available | Positive | 2317765 - 2319858 | 77697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.