Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | CC99x_009495 | Not Available | Positive | 2287008 - 2287493 | 17061.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CC99x_009500 | Not Available | Positive | 2287497 - 2288579 | 40525.8 |
| hypothetical protein | CC99x_009505 | Not Available | Negative | 2288643 - 2289851 | 46677.1 |
| endonuclease/exonuclease/phosphatase family protein | CC99x_009510 | Not Available | Positive | 2290010 - 2290993 | 37209.0 |
| tigr03016 family pep-cterm system-associated outer membrane protein | CC99x_009515 | Not Available | Negative | 2291042 - 2292421 | 53230.6 |
| hypothetical protein | CC99x_009520 | Not Available | Negative | 2292608 - 2293417 | 30122.5 |
| hypothetical protein | CC99x_009525 | Not Available | Negative | 2293430 - 2294989 | 59639.4 |
| polysaccharide export protein | CC99x_009530 | Not Available | Negative | 2294989 - 2295618 | 23178.5 |
| pep-cterm-box response regulator transcription factor | CC99x_009535 | Not Available | Negative | 2295637 - 2297037 | 52566.8 |
| pep-cterm system histidine kinase prsk | CC99x_009540 | Not Available | Negative | 2297049 - 2299163 | 79788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.