Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CC99x_009445 | Not Available | Negative | 2274076 - 2275170 | 41223.4 |
| glycosyltransferase, exosortase a system-associated | CC99x_009450 | Not Available | Negative | 2275154 - 2276368 | 46174.2 |
| amidotransferase 1, exosortase a system-associated | CC99x_009455 | Not Available | Negative | 2276337 - 2278274 | 74074.7 |
| glycosyltransferase | CC99x_009460 | Not Available | Negative | 2278520 - 2279626 | 42332.8 |
| exosortase a | CC99x_009465 | Not Available | Negative | 2279635 - 2281158 | 57765.1 |
| tigr03087 family pep-cterm/xrta system glycosyltransferase | CC99x_009470 | Not Available | Negative | 2281184 - 2282386 | 46554.3 |
| femab family pep-cterm system-associated protein | CC99x_009475 | Not Available | Negative | 2282383 - 2283459 | 41513.0 |
| duf3473 domain-containing protein | CC99x_009480 | Not Available | Negative | 2283404 - 2284303 | 34603.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | CC99x_009485 | Not Available | Negative | 2284296 - 2285450 | 43062.6 |
| threonylcarbamoyl-amp synthase | CC99x_009490 | Not Available | Negative | 2285849 - 2286874 | 37625.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.