Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase | CC99x_009395 | Not Available | Positive | 2262359 - 2264257 | 72744.5 |
| hypothetical protein | CC99x_009400 | Not Available | Positive | 2264418 - 2265287 | 31243.0 |
| hypothetical protein | CC99x_009405 | Not Available | Positive | 2265621 - 2266310 | 26005.2 |
| polysaccharide deacetylase family protein | CC99x_009410 | Not Available | Negative | 2266478 - 2267467 | 37975.4 |
| putative o-glycosylation ligase, exosortase a system-associated | CC99x_009415 | Not Available | Negative | 2267485 - 2268780 | 48873.4 |
| aminoglycoside phosphotransferase family protein | CC99x_009420 | Not Available | Negative | 2268777 - 2269628 | 33330.2 |
| hypothetical protein | CC99x_009425 | Not Available | Negative | 2269618 - 2270184 | 22077.8 |
| glycosyltransferase | CC99x_009430 | Not Available | Negative | 2270272 - 2271252 | 38066.7 |
| lipopolysaccharide biosynthesis protein | CC99x_009435 | Not Available | Negative | 2271249 - 2272721 | 55666.4 |
| amp-binding protein | CC99x_009440 | Not Available | Negative | 2272734 - 2274095 | 51709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.