Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat repeat domain-containing protein | CC99x_009345 | Not Available | Negative | 2250030 - 2251016 | 37790.1 |
| hypothetical protein | CC99x_009350 | Not Available | Negative | 2251475 - 2251969 | 18537.7 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | CC99x_009355 | Not Available | Negative | 2251969 - 2252295 | 12376.0 |
| dead/deah box helicase | CC99x_009360 | Not Available | Negative | 2252809 - 2256162 | 128229.0 |
| udp-glucose 4-epimerase gale | CC99x_009365 | Not Available | Positive | 2256458 - 2257438 | 35665.9 |
| metal-dependent hydrolase | CC99x_009370 | Not Available | Positive | 2257457 - 2258347 | 34589.7 |
| alpha/beta hydrolase | CC99x_009375 | Not Available | Negative | 2258334 - 2259257 | 35364.5 |
| alanine dehydrogenase | CC99x_009380 | Not Available | Negative | 2259309 - 2260421 | 38998.5 |
| tetratricopeptide repeat protein | CC99x_009385 | Not Available | Positive | 2260676 - 2261242 | 21657.6 |
| gnat family n-acetyltransferase | CC99x_009390 | Not Available | Positive | 2261220 - 2262341 | 44239.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.