Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | CC99x_009295 | Not Available | Positive | 2234710 - 2235186 | 18142.2 |
| aldo/keto reductase | CC99x_009300 | Not Available | Negative | 2235240 - 2236268 | 38256.7 |
| hypothetical protein | CC99x_009305 | Not Available | Positive | 2236411 - 2236935 | 20059.9 |
| 4,5-dopa dioxygenase extradiol | CC99x_009310 | Not Available | Positive | 2237223 - 2237996 | 28680.4 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | CC99x_009315 | Not Available | Negative | 2241031 - 2241636 | 23318.3 |
| type i-f crispr-associated protein csy3 | CC99x_009320 | Not Available | Negative | 2241648 - 2242637 | 36981.5 |
| type i-f crispr-associated protein csy2 | CC99x_009325 | Not Available | Negative | 2242647 - 2243711 | 40483.5 |
| type i-f crispr-associated protein csy1 | CC99x_009330 | Not Available | Negative | 2243708 - 2245225 | 58042.2 |
| type i-f crispr-associated helicase cas3f | CC99x_009335 | Not Available | Negative | 2245222 - 2248554 | 127191.0 |
| type i-f crispr-associated endonuclease cas1f | CC99x_009340 | Not Available | Negative | 2248551 - 2249516 | 36252.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.