Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | CC99x_009245 | Not Available | Negative | 2213020 - 2213403 | 13893.7 |
| citrate (si)-synthase | CC99x_009250 | Not Available | Positive | 2213809 - 2215101 | 48299.3 |
| hypothetical protein | CC99x_009255 | Not Available | Negative | 2215183 - 2217486 | 87214.0 |
| duf3638 domain-containing protein | CC99x_009260 | Not Available | Negative | 2217638 - 2229121 | 441626.0 |
| hypothetical protein | CC99x_009265 | Not Available | Negative | 2229512 - 2230528 | 39372.5 |
| hypothetical protein | CC99x_009270 | Not Available | Negative | 2230615 - 2230887 | 10169.5 |
| hypothetical protein | CC99x_009275 | Not Available | Negative | 2230938 - 2231888 | 35843.1 |
| hypothetical protein | CC99x_009280 | Not Available | Positive | 2232102 - 2232584 | 17420.3 |
| hypothetical protein | CC99x_009285 | Not Available | Negative | 2232666 - 2234120 | 54929.5 |
| hypothetical protein | CC99x_009290 | Not Available | Positive | 2234336 - 2234710 | 14550.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.