Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CC99x_009195 | Not Available | Positive | 2192494 - 2193267 | 28844.9 |
| duf4347 domain-containing protein | CC99x_009200 | Not Available | Positive | 2193357 - 2197070 | 131355.0 |
| hypothetical protein | CC99x_009205 | Not Available | Positive | 2197299 - 2203625 | 219687.0 |
| succinate--coa ligase subunit alpha | CC99x_009210 | Not Available | Negative | 2203698 - 2204570 | 29864.2 |
| adp-forming succinate--coa ligase subunit beta | CC99x_009215 | Not Available | Negative | 2204573 - 2205736 | 41835.9 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CC99x_009220 | Not Available | Negative | 2205755 - 2206951 | 42851.0 |
| 2-oxoglutarate dehydrogenase e1 component | CC99x_009225 | Not Available | Negative | 2206968 - 2209814 | 105980.0 |
| succinate dehydrogenase iron-sulfur subunit | CC99x_009230 | Not Available | Negative | 2210095 - 2210802 | 26568.1 |
| succinate dehydrogenase flavoprotein subunit | CC99x_009235 | Not Available | Negative | 2210808 - 2212571 | 64306.0 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | CC99x_009240 | Not Available | Negative | 2212691 - 2213023 | 12951.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.