Candidatus Berkiella cookevillensis

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Candidatus Berkiellales

Family

Candidatus Berkiellaceae

Genus

Candidatus Berkiella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCandidatus Berkiellales
FamilyCandidatus Berkiellaceae
GenusCandidatus Berkiella
SpeciesCandidatus Berkiella cookevillensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiofilm sample from a cooling tower
Biotic relationshipNot Available
Host(s)Amoeba, Acanthamoeba polyphaga
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Berkiella cookevillensis strain CC99 CC99_02, whole

Gene Summary

Adenine Count

924980 bp

Thymine Count

927602 bp

Guanine Count

565100 bp

Cytosine Count

567154 bp

Genome Length

2984836 bp

Protein-coding Genes

2513 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3298 and duf4163 domain-containing proteinCC99x_008995Not AvailablePositive2129742 - 213097747428.7
hypothetical proteinCC99x_009000Not AvailableNegative2131309 - 213281756862.2
hypothetical proteinCC99x_009005Not AvailableNegative2132851 - 213332718660.0
utp--glucose-1-phosphate uridylyltransferase galuCC99x_009010Not AvailableNegative2133860 - 213477433302.4
polysaccharide biosynthesis proteinCC99x_009015Not AvailableNegative2134789 - 213666070467.8
glycosyltransferase family 4 proteinCC99x_009020Not AvailableNegative2136988 - 213802839408.0
orotidine-5'-phosphate decarboxylaseCC99x_009025Not AvailableNegative2138015 - 213873726347.0
lipopolysaccharide assembly protein lapbCC99x_009030Not AvailableNegative2138984 - 214014444469.0
lapa family proteinCC99x_009035Not AvailableNegative2140151 - 21404239912.65
30s ribosomal protein s1CC99x_009040Not AvailableNegative2140578 - 214229663507.6

Displaying genes 1791 – 1800 of 2571 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.