Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Candidatus Berkiellales
Family
Candidatus Berkiellaceae
Genus
Candidatus Berkiella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Candidatus Berkiellales |
| Family | Candidatus Berkiellaceae |
| Genus | Candidatus Berkiella |
| Species | Candidatus Berkiella cookevillensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biofilm sample from a cooling tower |
| Biotic relationship | Not Available |
| Host(s) | Amoeba, Acanthamoeba polyphaga |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
924980 bp
Thymine Count
927602 bp
Guanine Count
565100 bp
Cytosine Count
567154 bp
Genome Length
2984836 bp
Protein-coding Genes
2513 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | CC99x_000770 | Not Available | Negative | 180437 - 181747 | 48818.9 |
| methionine adenosyltransferase | CC99x_000775 | Not Available | Negative | 181776 - 182942 | 42758.0 |
| thioredoxin family protein | CC99x_000780 | Not Available | Positive | 183065 - 183622 | 20739.1 |
| transketolase | CC99x_000785 | Not Available | Positive | 183906 - 185909 | 73888.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CC99x_000790 | Not Available | Positive | 185925 - 186938 | 36520.8 |
| phosphoglycerate kinase | CC99x_000795 | Not Available | Positive | 186954 - 188144 | 42885.2 |
| pyruvate kinase | CC99x_000800 | Not Available | Positive | 188148 - 189581 | 52144.6 |
| fructose-bisphosphate aldolase class ii | CC99x_000805 | Not Available | Positive | 189600 - 190664 | 38739.7 |
| hypothetical protein | CC99x_000810 | Not Available | Negative | 190970 - 191458 | 18766.3 |
| hypothetical protein | CC99x_000815 | Not Available | Negative | 191667 - 196733 | 187181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.